On this #WOMENINSCIENCE #GIRLSINSTEM day we are thrilled to share @fannyhartmann.bsky.social newest work @molbioevol
https://doi.org/10.1093/molbev/msaf026
#Genomics #Evolution #Transposons #Supergenes #seXYevol
1/5
On this #WOMENINSCIENCE #GIRLSINSTEM day we are thrilled to share @fannyhartmann.bsky.social newest work @molbioevol
https://doi.org/10.1093/molbev/msaf026
#Genomics #Evolution #Transposons #Supergenes #seXYevol
1/5
How Y became a giant
https://www.science.org/doi/10.1126/science.adj7430
Featuring team's postdoc Quentin Rougemont as one of the first authors, he applied his #EASYstrata pipeline to uncover the evolution of the largest #y_chromosome ever sequenced to date
Repo: https://github.com/QuentinRougemont/EASYstrata/
#preprint: https://www.biorxiv.org/content/10.1101/2025.01.06.631483v1.full
#Genomics #bioinformatics #Evolution #seXYevol
#seXYevol (or shall we say seZ0evol) #Octopous @CurrentBiology
https://scientificnetwork.de/@cellbionews/113941025784026535
Final paper from Marine Duhamel's PhD and second installment of our project on the causes and consequences of #recombination suppression in #sex determining #Chromosomes
The dynamics of #transposable #elements accumulation in non-recombining regions
Fully formatted, #peer reviewed and #openaccess at
https://www.nature.com/articles/s41467-023-41413-4
Interested in what we have done with many of the #bioinformatics tools you and people like you have released? #ismbeccb2023
What happen when recombination stops, the tempo of #seXYevol today at #EvolCompBiol Pasteur auditorium 11h30
#TE #sequence # genome #degeneration #molecular #dating #denovo #genes #EvolutionaryBiology
https://gitlab.com/marine.c.duhamel/microtep
https://www.biorxiv.org/content/10.1101/2022.08.03.502670v2.full #preprint version final version coming out soon
https://onlinelibrary.wiley.com/doi/full/10.1111/jeb.13991 @JEB https://academic.oup.com/mbe/article/39/4/msac060/6553583 @officialSMBE
Tetrapolar #fungi with multi-allelic little degenerated HD loci and biallelic highly degenerated PR, fascinating work from @schwessinger team
https://www.biorxiv.org/content/10.1101/2023.03.02.530769v1.full
Ps. We think Pst 134E chromosomes 9 n Figure 5 should be flipped
#Recap of #publications during our social media hiatus of late 2022
Review on cheese-making #fungi by @tatianagiraud6@twitter.com and @jeanne_ropars@twitter.com, celebrating ten years working on #CheesyFungi
https://doi.org/10.1016/j.mib.2022.102236
Our first @PeerCommunityJournal lead by PhD student @TezenasEmilie@twitter.com shows that linkage to a permanently heterozygous site decreases the purging probability and increases the purging time of mutations under selfing #seXYevol
https://doi.org/10.24072/pcjournal.238
Recommendation
https://doi.org/10.24072/pci.evolbiol.100635
#introduction #how /4
So, this is how we think it works: we tell each other what we're up to and what we like/dislike, timelines will soon be full of interesting/relevant stuff
Regular or recurrent hashtags:
#semIDEEV - institutional weekly seminars #Ecology #Evolution
#CheesyFungi - research on the living stuff making your #cheese more interesting
#seXYevol - the #EvolutionaryBiology of sex chromosomes
#ShouldTryThis - new methods on #bioinformatics #popgen #Genomics
#FungiFriday
#introduction #what 1/
We are the #Genetics #Ecology and #Evolution team of the #CNRS - #AgroParisTech - #UPSaclay powered Laboratoire ESE, part of the Institut Diversité Écologie et Évolution du Vivant #IDEEV
We are broadly interested in evolutionary genomics, in particular the evolution of sex chromosomes #seXYevol, the domestication of cheese-making fungi #CheesyFungi, the footprints of pathogenicity, and molecular coevolution in symbiosis #CoEvolSym and in antagonistic interactions